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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31629763_31630530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31629763 - 31630530

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TTGAATTCAACT

Flanking Amino Acid:

PLNSRSNKLHFAFRLYDLDK

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

76.4

Major BPS

74.2

0.6

0.9

75.7

Major PPT

89.2

0.88

0.6

Minor 5ss

34.9

-1.7

52.2

44.4

Minor BPS

53.8

0.2

1.8

74.08

42.5

Associated Gene:

Gene:

CHP1

Ensembl Gene ID:

ENSAPLG00000013582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026174

31625732 - 31639709

13978

ENSAPLT00000014163

31625732 - 31643034

17303