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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31630659_31631928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31630659 - 31631928

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

AATGCTTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

ACCTGCTAAAAT

Flanking Amino Acid:

DRIINAFFPEGEDQVNFRGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

33.5

Major BPS

0.55

1.1

63.4

44.3

Major PPT

68.7

0.42

1.1

62.2

43.5

Minor 5ss

-1.5

2.9

42.4

44.3

Minor BPS

46.6

-0.1

2.2

62.9

47.1

Associated Gene:

Gene:

CHP1

Ensembl Gene ID:

ENSAPLG00000013582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026174

31625732 - 31639709

13978

ENSAPLT00000014163

31625732 - 31643034

17303