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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31638334_31639571_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31638334 - 31639571

Intron Length:

1238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTAACCC

5'SS Class:

major

3'SS Sequence:

TTTCGTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ACGTGCTAATCT

Flanking Amino Acid:

SCGSARLLTRVSHSQITRLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

54.6

36.6

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

84.4

0.77

0.8

81.6

30.5

Minor 5ss

33.2

-1.9

3.1

42.8

44.3

Minor BPS

44.6

-0.3

2.2

61.44

48.4

Associated Gene:

Gene:

CHP1

Ensembl Gene ID:

ENSAPLG00000013582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026174

31625732 - 31639709

13978