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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31648340_31649500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31648340 - 31649500

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATTAT

U12 Branch Point Sequence:

CTGTTTTTCATT

Flanking Amino Acid:

LIASRRNLAQQCYT*NSSVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

60.8

0.27

1.2

51.8

43.6

Major PPT

78.1

0.63

0.9

34.3

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

53.7

0.2

1.7

70.08

42.4

Associated Gene:

Gene:

EXD1

Ensembl Gene ID:

ENSAPLG00000013650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041521

31643289 - 31662915

19627

ENSAPLT00000014216

31644282 - 31662915

18634