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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31656770_31662140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31656770 - 31662140

Intron Length:

5371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTATCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCCCTTATCA

Flanking Amino Acid:

MDLEITLGAQSPLAGSCQRS

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.3

0.73

0.8

28.3

Minor 5ss

32.5

-2

3.1

41.1

45.5

Minor BPS

75.4

0.79

1.5

85.19

34.1

Associated Gene:

Gene:

EXD1

Ensembl Gene ID:

ENSAPLG00000013650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041521

31643289 - 31662915

19627

ENSAPLT00000014216

31644282 - 31662915

18634