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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31681411_31681666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31681411 - 31681666

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AGAGCTCTAATG

Flanking Amino Acid:

VVVNITQEDYDSNYYKAQAL

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

82.2

0.8

0.9

81.6

Major PPT

80.5

0.69

0.9

77.4

41.2

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

46.4

-0.4

1.8

47.91

39.6

Associated Gene:

Gene:

INO80

Ensembl Gene ID:

ENSAPLG00000013656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014312

31671099 - 31727770

56672