Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_31688438_31688935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31688438 - 31688935

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCAGG

5'SS Class:

major

3'SS Sequence:

CTTTCCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GATACATTATTT

Flanking Amino Acid:

GTPIQNTMAELWALLHFIMP

Intron Amino Acid Position:

692

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

58.1

46.2

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

84.4

0.77

0.7

77.2

31.5

Minor 5ss

44.9

-0.5

2.6

57.9

46.3

Minor BPS

49.4

0.03

1.9

68.39

Associated Gene:

Gene:

INO80

Ensembl Gene ID:

ENSAPLG00000013656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014312

31671099 - 31727770

56672