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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31700475_31704813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31700475 - 31704813

Intron Length:

4339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTACTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ACAACCTGAATA

Flanking Amino Acid:

PSFLCIASPRVTAVPLEFYC

Intron Amino Acid Position:

1021

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

71.6

40.2

Major BPS

84.6

0.86

41.2

Major PPT

75.9

0.58

0.8

70.4

34.6

Minor 5ss

34.1

-1.8

2.8

34.5

Minor BPS

56.2

0.19

1.5

60.6

39.1

Associated Gene:

Gene:

INO80

Ensembl Gene ID:

ENSAPLG00000013656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014312

31671099 - 31727770

56672