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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31710469_31715276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31710469 - 31715276

Intron Length:

4808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATAT

Flanking Amino Acid:

QMTRMIDLLEEYMVYRKHTY

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

40.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.8

0.74

0.9

77.1

37.1

Minor 5ss

28.4

-2.5

3.5

47.6

Minor BPS

0.3

1.9

81.29

40.2

Associated Gene:

Gene:

INO80

Ensembl Gene ID:

ENSAPLG00000013656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014312

31671099 - 31727770

56672