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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31742066_31742164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31742066 - 31742164

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCGGTGAGG

5'SS Class:

major

3'SS Sequence:

CTCTGTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TCTGTCCCACAG

Flanking Amino Acid:

GDTFHRGSEKPGRVVTLMED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

55.8

41.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

74.6

0.55

0.8

68.2

32.2

Minor 5ss

14.6

-4.1

3.5

21.6

37.4

Minor BPS

36.4

-1.1

40.66

43.5

Associated Gene:

Gene:

CHAC1

Ensembl Gene ID:

ENSAPLG00000001819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001812

31741429 - 31742296

868