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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31774560_31775628_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
31774560 - 31775628

Intron Length:
1069

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGC|GTAAGTGCC

5'SS Class:
major

3'SS Sequence:
GTTCTCTTTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTCTCTTTACAG

Flanking Amino Acid:
PGWTGEYCTEPICLSGCTEQ

Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.6
0.44
1.4
66.1
41.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
86
0.81
0.8
79.9
32.1

Minor 5ss
34.9
-1.7
3.1
40.5
38.7

Minor BPS
56.8
0.07
1.8
63.96
44.2

Associated Gene:

Gene:
DLL4

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31769381 - 31781085
11705