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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31900324_31904014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31900324 - 31904014

Intron Length:

3691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGCC

5'SS Class:

major

3'SS Sequence:

GTTCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGTTGTATAAGT

Flanking Amino Acid:

SRAAVGIPHSGYVNARLEKE

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

65.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

85.2

0.79

0.8

77.2

37.1

Minor 5ss

38.1

-1.3

3.3

52.1

44.7

Minor BPS

47.9

-0

2.3

73.24

43.7

Associated Gene:

Gene:

VPS18

Ensembl Gene ID:

ENSAPLG00000016030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016722

31895941 - 31904324

8384