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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31939982_31940883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31939982 - 31940883

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTAACATGAAAT

Flanking Amino Acid:

DGSDEVYCEQYAREFNRLQK

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

89.7

0.98

0.7

89.9

Major PPT

89.4

0.89

0.7

84.5

30.4

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

0.11

1.9

74.04

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042150

31935521 - 31953536

18016

ENSAPLT00000016851

31935521 - 31953536

18016