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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31941010_31942289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31941010 - 31942289

Intron Length:

1280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGATGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAACT

Flanking Amino Acid:

KGSVGGRQMPVCNGNCQAPS

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.2

0.48

66.5

39.7

Minor 5ss

42.4

-0.8

3.1

59.1

45.6

Minor BPS

0.49

1.9

87.84

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016851

31935521 - 31953536

18016