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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31941855_31942289_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31941855 - 31942289

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

AACTTCATGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTCCATAACT

Flanking Amino Acid:

KGSVGGRQMPGHVLQPLPES

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

78.6

0.71

79.6

32.9

Major PPT

59.3

0.21

52.2

41.8

Minor 5ss

42.4

-0.8

3.1

59.1

45.6

Minor BPS

85.2

1.18

1.4

101.4

24.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042150

31935521 - 31953536

18016