Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_31958781_31958878_F

Intron Information:

Intron Rank:

125029

Intron Class:

major

Intron Phase:

Intron Coordinates:

31958781 - 31958878

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGGTGC

5'SS Class:

major

3'SS Sequence:

ATCTTCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAC

U12 Branch Point Sequence:

AGAGGATTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

55.7

44.5

Major BPS

64.1

0.35

1.2

67.6

36.5

Major PPT

76.3

0.59

0.9

70.6

34.5

Minor 5ss

35.2

-1.7

3.5

40.6

Minor BPS

46.5

-0.2

2.1

56.77

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024606

31958596 - 31959883

1288