Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_31980506_31981112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31980506 - 31981112

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATCGTTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CTCTTTTCAATT

Flanking Amino Acid:

AKWSPPENYKKRVAAFEAKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.3

0.57

68.3

41.7

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

57.6

0.32

1.5

70.72

41.5

Associated Gene:

Gene:

ZFYVE19

Ensembl Gene ID:

ENSAPLG00000000937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000960

31973094 - 31983311

10218