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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31985863_31990370_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31985863 - 31990370

Intron Length:

4508

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCAGGGGTA

5'SS Class:

weak_major

3'SS Sequence:

CAGGGACATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAG

U12 Branch Point Sequence:

CTGGCCAAAAGA

Flanking Amino Acid:

VTATGFRASYSQRFKIQVPA

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.3

64.3

37.3

Major BPS

0.22

1.5

67.7

36.5

Major PPT

46.6

-0.2

1.1

35.1

39.5

Minor 5ss

23.3

-3.1

4.5

41.7

46.3

Minor BPS

41.6

-0.6

2.2

51.24

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001297

31985810 - 32000752

14943