Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_32582466_32582862_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32582466 - 32582862

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTCGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TCTTGCTCGAGC

Flanking Amino Acid:

RILACGGDGTVGWILSILDQ

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

61.3

0.28

30.6

Major PPT

66.6

0.38

62.6

38.4

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

46.2

-0.3

2.3

61.6

44.4

Associated Gene:

Gene:

DGKZ

Ensembl Gene ID:

ENSAPLG00000015859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016638

32576010 - 32595944

19935