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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32583963_32584245_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
32583963 - 32584245

Intron Length:
283

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGTGGC

5'SS Class:
strong_major

3'SS Sequence:
CTTCTTTCCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAATGAC

U12 Branch Point Sequence:
ATGACCTGGACT

Flanking Amino Acid:
RVTLEFHESREANPEKFNSR

Intron Amino Acid Position:
458

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.4
0.81
1
73.2
37.5

Major BPS
54.6
0.12
1.1
47.1
36.1

Major PPT
79.3
0.66
0.7
73.1
31.8

Minor 5ss
31.6
-2.1
3.4
43.4
44.3

Minor BPS
60.8
0.42
1.6
75.27
41.2

Associated Gene:

Gene:
DGKZ

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32576010 - 32595944
19935