Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_32586830_32586964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32586830 - 32586964

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TCCTGTTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCACAAT

U12 Branch Point Sequence:

TGCTCCCTGAGT

Flanking Amino Acid:

HYDKEKLKEASVPLGIIVVP

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.2

34.6

Major BPS

-0.3

1.4

42.8

Major PPT

76.6

0.6

71.9

Minor 5ss

30.4

-2.2

3.2

44.3

43.6

Minor BPS

51.9

0.14

72.81

44.1

Associated Gene:

Gene:

DGKZ

Ensembl Gene ID:

ENSAPLG00000015859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016638

32576010 - 32595944

19935