About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_32589991_32590484_F


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
32589991 - 32590484

Intron Length:
494

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGCGTG

5'SS Class:
strong_major

3'SS Sequence:
TTGTGCGTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAA

U12 Branch Point Sequence:
TTGCTTCTAAAG

Flanking Amino Acid:
DRFYRIDRAQEHLNYVTEIS

Intron Amino Acid Position:
724

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.9
0.82
0.9
72.2
39.5

Major BPS
85.3
0.88
0.8
84.2
21.8

Major PPT
75.2
0.57
1
65.7
45.4

Minor 5ss
34.5
-1.8
3.4
45.9
49.3

Minor BPS
46.9
-0.3
1.8
54.25
40.8

Associated Gene:

Gene:
DGKZ

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32576010 - 32595944
19935