Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_32601816_32601890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32601816 - 32601890

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGGGGG

5'SS Class:

major

3'SS Sequence:

TTGCCTCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAACAC

U12 Branch Point Sequence:

ACGTCCGTAACA

Flanking Amino Acid:

IPCNWKKKFGADCKYKFESW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

56.5

42.5

Major BPS

47.4

-0.1

1.2

55.1

40.5

Major PPT

78.1

0.63

0.8

31.8

Minor 5ss

29.3

-2.4

3.4

37.3

47.4

Minor BPS

0.31

2.1

69.31

43.3

Associated Gene:

Gene:

MDK

Ensembl Gene ID:

ENSAPLG00000015677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016345

32601498 - 32602202

705