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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32757976_32758319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32757976 - 32758319

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

TTTCCAATAATG

Flanking Amino Acid:

YRINLAFMSTRQFERTPPIM

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

80.6

0.69

0.9

73.7

36.9

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

53.4

-0

1.9

67.5

39.7

Associated Gene:

Gene:

ATG13

Ensembl Gene ID:

ENSAPLG00000015034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015706

32754223 - 32768260

14038

ENSAPLT00000040168

32754223 - 32768260

14038

ENSAPLT00000021542

32754223 - 32768260

14038