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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32780407_32780454_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32780407 - 32780454

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAAGCTG

5'SS Class:

weak_major

3'SS Sequence:

GCTGAAGTGAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

AAGTGCTGAAGT

Flanking Amino Acid:

VNFLSELEEYCYLSPVCLGL

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.3

53.7

44.9

Major BPS

0.42

1.1

57.3

41.7

Major PPT

42.8

-0.4

1.7

38.2

43.4

Minor 5ss

29.7

-2.3

3.4

37.1

Minor BPS

-0.1

2.1

64.4

45.6

Associated Gene:

Gene:

ARHGAP1

Ensembl Gene ID:

ENSAPLG00000014489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015158

32776000 - 32795291

19292