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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32820683_32822311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32820683 - 32822311

Intron Length:

1629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTCTTTACTT

Flanking Amino Acid:

EGKGRIPSSTGISPQMEGTC

Intron Amino Acid Position:

1902

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

82.9

29.9

Major BPS

0.6

65.6

41.1

Major PPT

0.47

0.8

60.9

35.2

Minor 5ss

55.6

0.19

2.5

75.5

40.6

Minor BPS

75.9

0.89

1.5

91.31

32.6

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763