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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32822472_32822564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32822472 - 32822564

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAC

U12 Branch Point Sequence:

TACACAGGAACT

Flanking Amino Acid:

KIGSKENTKEGLAELYEYKK

Intron Amino Acid Position:

1849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

78.1

36.6

Major BPS

56.2

0.16

64.7

Major PPT

0.77

0.7

76.7

31.9

Minor 5ss

34.5

-1.8

3.3

50.2

Minor BPS

43.5

-0.4

2.3

64.33

45.2

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763