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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32822649_32823191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32822649 - 32823191

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTATTTATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTCCCTTTATT

Flanking Amino Acid:

KDTEKGASRTEEKASKAKVN

Intron Amino Acid Position:

1821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

82.1

0.72

0.8

82.1

34.6

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

73.8

0.83

1.5

89.88

33.9

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763