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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32823330_32823407_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32823330 - 32823407

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGCC

5'SS Class:

major

3'SS Sequence:

TGTTTTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTCTATAAAG

Flanking Amino Acid:

HTLCKLKGPKILDHLTMIDN

Intron Amino Acid Position:

1775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.3

68.7

37.5

Major BPS

84.4

0.85

34.5

Major PPT

86.2

0.81

0.7

85.6

29.2

Minor 5ss

27.1

-2.6

3.1

34.4

41.3

Minor BPS

57.7

0.1

1.8

66.64

40.6

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763