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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32823597_32824382_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32823597 - 32824382

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCATTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

CTTGCTCTAAGT

Flanking Amino Acid:

SPKFSELVMKCLWRMVRLLP

Intron Amino Acid Position:

1712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

86.9

30.1

Major BPS

72.5

0.56

1.2

39.9

Major PPT

75.6

0.58

0.9

65.9

39.7

Minor 5ss

34.7

-1.7

3.1

49.5

46.7

Minor BPS

49.2

0.02

2.1

71.75

45.6

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763