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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32825066_32825346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32825066 - 32825346

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCAATTGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTCCTCAATT

Flanking Amino Acid:

YSCIIGSMISLFQIESLARE

Intron Amino Acid Position:

1624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

73.8

42.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

62.2

0.28

57.9

37.1

Minor 5ss

37.2

-1.5

3.6

57.4

46.8

Minor BPS

75.7

0.88

1.5

88.28

37.2

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763