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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32826340_32826787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32826340 - 32826787

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTGAACTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TTTTCTTGAACT

Flanking Amino Acid:

IFEPVLIPEPKIRAVSPHFD

Intron Amino Acid Position:

1523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.9

33.7

Major BPS

74.6

0.61

65.6

41.4

Major PPT

65.3

0.34

62.6

43.8

Minor 5ss

34.1

-1.8

41.4

39.1

Minor BPS

82.9

1.11

1.2

96.98

27.3

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763