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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32826962_32828096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32826962 - 32828096

Intron Length:

1135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATATAATTAACG

Flanking Amino Acid:

GPVEDMSSKLNQNRNMGSHS

Intron Amino Acid Position:

1465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

82.5

29.7

Major BPS

0.72

78.4

31.2

Major PPT

74.7

0.56

0.9

69.7

36.6

Minor 5ss

45.2

-0.5

2.6

59.7

39.1

Minor BPS

57.6

0.1

1.9

65.6

41.3

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763