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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32828270_32829735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32828270 - 32829735

Intron Length:

1466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

ACAACTCAAACT

Flanking Amino Acid:

GDQVFKLIGNLSEKDMSMLE

Intron Amino Acid Position:

1408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.5

27.8

Major BPS

74.2

0.6

0.9

75.7

Major PPT

0.85

0.7

85.1

29.4

Minor 5ss

38.7

-1.3

3.4

53.7

43.8

Minor BPS

45.2

-0.2

1.9

60.49

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763