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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32829930_32830740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32829930 - 32830740

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAAAT

5'SS Class:

major

3'SS Sequence:

TTTCTTCCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TGTGTGTCATTT

Flanking Amino Acid:

TKSKNSKQRAECLEELGCLV

Intron Amino Acid Position:

1343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

0.9

76.8

33.7

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

84.8

0.78

0.7

78.2

30.7

Minor 5ss

28.3

-2.5

3.2

46.4

Minor BPS

40.3

-0.6

2.3

59.88

44.3

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763