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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32831329_32831604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32831329 - 32831604

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCACTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTCCTGTCACT

Flanking Amino Acid:

HNKALAVMIEHLESEKDGVI

Intron Amino Acid Position:

1230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

64.5

0.33

1.1

60.9

39.6

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

50.7

0.1

2.4

80.9

41.2

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763