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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32831755_32832447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32831755 - 32832447

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGGCTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CTTGCTTTGAGT

Flanking Amino Acid:

QRMKDEKGLKVLKWNFTTPR

Intron Amino Acid Position:

1180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

78.5

0.64

0.9

72.5

37.6

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

56.8

0.3

1.8

74.14

43.6

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645

ENSAPLT00000011658

32819804 - 32857566

37763