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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32832565_32835271_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32832565 - 32835271

Intron Length:

2707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTTTATATT

5'SS Class:

weak_major

3'SS Sequence:

TCAGGGTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTTTTTCAGG

Flanking Amino Acid:

FIGLNSTLKFGKKVLSKPTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.2

63.7

39.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

60.8

0.24

1.1

52.6

45.8

Minor 5ss

-0.4

2.7

66.8

38.2

Minor BPS

51.2

-0.1

2.1

65.89

42.8

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040394

32819804 - 32835448

15645