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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32833871_32835363_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32833871 - 32835363

Intron Length:

1493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTCT

5'SS Class:

weak_major

3'SS Sequence:

GTTGTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

GTAGTTTGAAAT

Flanking Amino Acid:

AAPAKFQPASAFAEDSGSNT

Intron Amino Acid Position:

1108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.2

72.3

40.1

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

85.2

0.79

0.9

76.9

42.1

Minor 5ss

57.2

0.24

2.5

74.8

41.2

Minor BPS

48.1

-0

1.6

63.28

40.7

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763