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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32835500_32835863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32835500 - 32835863

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

CTCTCTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TGTCCATTATTT

Flanking Amino Acid:

KMAKATSKLKPTSKDQVLAM

Intron Amino Acid Position:

1063

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

68.1

0.45

73.5

28.6

Major PPT

80.1

0.68

0.7

73.1

31.8

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

54.8

0.23

1.9

75.8

40.6

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763