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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32838837_32839376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32838837 - 32839376

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTCTGTTTATGT

Flanking Amino Acid:

SRLNDSNKILVQQTLSILQQ

Intron Amino Acid Position:

917

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.4

31.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.7

0.65

73.8

40.8

Minor 5ss

48.1

-0.2

2.5

63.2

43.8

Minor BPS

47.6

-0.1

2.2

70.73

46.8

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763