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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32839552_32839717_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32839552 - 32839717

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTTAG

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

VVDLLPRTDIGDKITAELVS

Intron Amino Acid Position:

858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

42.4

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

-1.3

40.1

45.9

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763