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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32840334_32840416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32840334 - 32840416

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

ATCTTTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

CTTTTATCATCT

Flanking Amino Acid:

VKTALAATNPAVRTSAITLL

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

76.3

0.59

72.7

37.1

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

48.4

-0

2.1

72.89

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763