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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32845196_32846094_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32845196 - 32846094

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

TCTTGGCTAACT

Flanking Amino Acid:

GPLKKAPAAKPGGPPKKGKP

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

81.6

0.71

0.8

73.8

36.8

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

47.1

-0.1

2.6

76.24

46.2

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763