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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32851328_32851717_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32851328 - 32851717

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

ATTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

CATTTATAAACT

Flanking Amino Acid:

KLPKDFYEKIEAKKWQERKE

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

64.4

41.6

Major BPS

78.6

0.71

78.6

Major PPT

83.8

0.76

0.8

77.6

36.1

Minor 5ss

40.6

-1

2.9

50.3

41.4

Minor BPS

53.6

0.19

73.68

43.1

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763