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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32851822_32852103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32851822 - 32852103

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

QQAVGGDGDGGDDDGEEVVP

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

80.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.2

0.72

0.9

76.5

37.5

Minor 5ss

39.8

-1.1

2.9

45.2

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763