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Intron Name: Anas_platyrhynchos_platyrhynchos_5_32852237_32853160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32852237 - 32853160

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGA

5'SS Class:

major

3'SS Sequence:

TTCCCTTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

ACATCTTGGATA

Flanking Amino Acid:

PPLQNINSVQLKELEEEWVK

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.9

43.8

Major BPS

75.8

0.64

65.8

Major PPT

78.4

0.64

0.9

32.5

Minor 5ss

37.4

-1.4

3.1

48.6

47.2

Minor BPS

51.1

0.03

1.4

57.32

36.1

Associated Gene:

Gene:

CKAP5

Ensembl Gene ID:

ENSAPLG00000011076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011658

32819804 - 32857566

37763