Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_32884337_32885041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32884337 - 32885041

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

TIAIGVDPREGKVYWSDSTL

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.61

0.8

35.5

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

LRP4

Ensembl Gene ID:

ENSAPLG00000009787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010282

32874741 - 32912588

37848