Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_32897863_32900242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32897863 - 32900242

Intron Length:

2380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

ATTCCCTTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTGTTTGATT

Flanking Amino Acid:

CKDGSDEENCPSDVPAATCS

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

70.4

0.46

0.9

70.3

35.7

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

67.2

0.62

1.7

86.34

34.1

Associated Gene:

Gene:

LRP4

Ensembl Gene ID:

ENSAPLG00000009787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010282

32874741 - 32912588

37848