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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33024158_33029616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33024158 - 33029616

Intron Length:

5459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TTTCTCTCATCT

Flanking Amino Acid:

MELTQKAARIVLMDDAMD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.4

40.3

Major BPS

82.6

0.81

0.8

71.7

Major PPT

73.8

0.54

0.8

66.4

39.1

Minor 5ss

-2.3

3.1

41.6

Minor BPS

58.8

0.35

1.8

81.56

39.8

Associated Gene:

Gene:

C11orf49

Ensembl Gene ID:

ENSAPLG00000009411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009807

33024132 - 33037149

13018